NGS Data

Big Data Analysis NGS Data RNA-seq

RNA-Seq Analysis Tutorial – Grosmannia clavigera

After following the steps in the above video, the files used for uploading sample and genome data are referenced by the SVL files contained in this zip: click here to download it. Those steps in...

Big Data Analysis NGS Data RNA-seq

RNA-Seq Analysis with Grosmannia clavigera – Part 1, Background

INTRO T-Bioinfo is a flexible bioinformatics computational system that provides an intuitive and user friendly interface for building pipelines of bioinformatics algorithms for the analysis of big...

NGS Data RNA-seq T-BioInfo Interface

RNA-Seq Analysis with Grosmannia clavigera – Part 2, Process

The first thing we will do as we go about the analysis is look at this section on top. As a default, this section works with an annotated model genome. You will see several options of genomes th...

Big Data Analysis Data Integration and Modeling Machine Learning NGS Data RNA-seq

RNA-Seq Data Analysis – Grosmannia clavigera

What is RNA-seq? RNA Sequencing, also known as RNA-seq, is a method for processing Next Generation Sequencing (NGS) data. RNA transcription occurs in an organism when genes are expressed, and the ...

ChIP-seq NGS Data

ChIP-Seq Analysis

ChIP-Seq Analysis ChIP-Seq, or chromatin immunoprecipitation sequencing, is a technique that performs analysis of transcriptome data generated by next-generation sequencing technologies or ...

NGS Data RNA-seq

RNA-Seq Data Analysis – Arabidopsis thaliana

  Arabidopsis. is a well studied organism that is often viewed as a model organism in plant biology. Some of it’s important advantages include: -Small size of genome -Short generatio...

Big Data Analysis ChIP-seq NGS Data

ChIP-Seq Data Analysis – Arabidopsis thaliana

In this tutorial we be using chIP-Seq on the T-BioInfo platform. We’ll be getting out data from a research paper, “Natural variation of H3K27me3 distribution between two Arabidopsis ...