Arabidopsis thaliana

NGS Data RNA-seq 2015-10-29 06:24:58 UTC

RNA-Seq Data Analysis – Arabidopsis thaliana

  Arabidopsis. is a well studied organism that is often viewed as a model organism in plant biology. Some of it’s important advantages include: -Small size of genome -Short generatio...

Big Data Analysis Data Integration and Modeling Machine Learning RNA-seq 2015-11-17 16:50:25 UTC

RNA-SEQ ANALYSIS WITH ARADIOPSIS THALIANA – PART 2, MACHINE LEARNING

For information about how to get to the data needed to run machine learning, please view Part 1. In this video, we go through several types of machine learning options on the T-BioInfo Platform: Qu...

Big Data Analysis RNA-seq 2015-11-17 16:50:53 UTC

RNA-Seq Analysis with Arabidopsis thaliana - Part 1, Gene Expression

The data referenced in the above video is from GSE57953, and is stored on our server in an error corrected format. The file to upload as NGS data is inside this ZIP file.

Big Data Analysis ChIP-seq NGS Data 2015-10-29 07:00:32 UTC

ChIP-Seq Data Analysis – Arabidopsis thaliana

In this tutorial we be using chIP-Seq on the T-BioInfo platform. We’ll be getting out data from a research paper, “Natural variation of H3K27me3 distribution between two Arabidopsis ...